Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN06295900_11896 | Not Available | Positive | 5700415 - 5701305 | 32676.2 |
| 2-isopropylmalate synthase | SAMN06295900_11897 | Not Available | Positive | 5701574 - 5703118 | 55709.1 |
| hypothetical protein | SAMN06295900_11898 | Not Available | Negative | 5703259 - 5703768 | 19512.4 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_11899 | Not Available | Positive | 5703988 - 5705316 | 46974.0 |
| ssu ribosomal protein s15p | SAMN06295900_118100 | Not Available | Positive | 5705516 - 5705785 | 10301.6 |
| polyribonucleotide nucleotidyltransferase | SAMN06295900_118101 | Not Available | Positive | 5706304 - 5708454 | 77170.8 |
| nadph2:quinone reductase | SAMN06295900_118102 | Not Available | Positive | 5708582 - 5709598 | 35224.6 |
| triosephosphate isomerase | SAMN06295900_118103 | Not Available | Positive | 5709857 - 5710630 | 26515.6 |
| protein translocase subunit secg | SAMN06295900_118104 | Not Available | Positive | 5710765 - 5711121 | 11582.3 |
| Trna-leu | Not Available | Not Available | Positive | 5711249 - 5711333 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.