Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295900_11886 | Not Available | Negative | 5691052 - 5692083 | 38223.1 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN06295900_11887 | Not Available | Negative | 5692128 - 5693066 | 35415.9 |
| uncharacterized membrane protein yckc, rdd family | SAMN06295900_11888 | Not Available | Negative | 5693423 - 5693977 | 20180.9 |
| protein of unknown function | SAMN06295900_11889 | Not Available | Negative | 5693974 - 5694717 | 26332.3 |
| protein of unknown function | SAMN06295900_11890 | Not Available | Negative | 5694742 - 5695158 | 14700.0 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN06295900_11891 | Not Available | Negative | 5695155 - 5695718 | 20949.7 |
| acetolactate synthase, large subunit | SAMN06295900_11892 | Not Available | Positive | 5696077 - 5697840 | 64703.9 |
| acetolactate synthase, small subunit | SAMN06295900_11893 | Not Available | Positive | 5697958 - 5698449 | 18132.2 |
| ketol-acid reductoisomerase | SAMN06295900_11894 | Not Available | Positive | 5698533 - 5699549 | 36524.9 |
| phosphatidylserine decarboxylase | SAMN06295900_11895 | Not Available | Positive | 5699755 - 5700393 | 23275.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.