Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, kdp operon response regulator kdpe | SAMN06295900_11876 | Not Available | Positive | 5681862 - 5682560 | 25711.9 |
| protein of unknown function | SAMN06295900_11877 | Not Available | Positive | 5682834 - 5683454 | 21326.3 |
| putative abc transport system permease protein | SAMN06295900_11878 | Not Available | Positive | 5683451 - 5686042 | 91760.8 |
| hemoglobin | SAMN06295900_11879 | Not Available | Positive | 5686085 - 5686507 | 16237.3 |
| ala-trna(pro) hydrolase | SAMN06295900_11880 | Not Available | Positive | 5686814 - 5687545 | 26558.9 |
| uncharacterized conserved protein, duf924 family | SAMN06295900_11881 | Not Available | Positive | 5687542 - 5688222 | 24713.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_11882 | Not Available | Negative | 5688280 - 5689035 | 25605.6 |
| hypothetical protein | SAMN06295900_11883 | Not Available | Negative | 5689042 - 5689626 | 20492.0 |
| transcriptional regulator, tetr family | SAMN06295900_11884 | Not Available | Negative | 5689623 - 5690351 | 28719.4 |
| diacylglycerol kinase (atp) | SAMN06295900_11885 | Not Available | Negative | 5690561 - 5691055 | 17523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.