Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | SAMN06295900_11866 | Not Available | Negative | 5670909 - 5671397 | 17761.7 |
| nicotinate-nucleotide adenylyltransferase | SAMN06295900_11867 | Not Available | Negative | 5671400 - 5672125 | 26243.3 |
| coproporphyrinogen oxidase | SAMN06295900_11868 | Not Available | Negative | 5672164 - 5673093 | 34715.0 |
| phosphoribosylamine--glycine ligase | SAMN06295900_11869 | Not Available | Negative | 5673252 - 5674526 | 45191.1 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN06295900_11870 | Not Available | Negative | 5674635 - 5675363 | 26023.6 |
| uracil phosphoribosyltransferase | SAMN06295900_11871 | Not Available | Negative | 5675577 - 5676227 | 23995.3 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN06295900_11872 | Not Available | Positive | 5676439 - 5677218 | 26718.1 |
| methylglyoxal synthase | SAMN06295900_11873 | Not Available | Positive | 5677320 - 5677709 | 13516.4 |
| nadph2:quinone reductase | SAMN06295900_11874 | Not Available | Positive | 5677804 - 5678778 | 34611.5 |
| osmosensitive k+ channel signal transduction histidine kinase | SAMN06295900_11875 | Not Available | Positive | 5679049 - 5681865 | 102080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.