Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11846 | Not Available | Negative | 5650954 - 5651298 | 12097.0 |
| hypothetical protein | SAMN06295900_11847 | Not Available | Negative | 5651398 - 5651556 | 6191.63 |
| hypothetical protein | SAMN06295900_11848 | Not Available | Positive | 5651727 - 5651975 | 9002.42 |
| amino acid transporter | SAMN06295900_11849 | Not Available | Positive | 5652338 - 5653786 | 49990.9 |
| phenylacetaldehyde dehydrogenase | SAMN06295900_11850 | Not Available | Positive | 5654008 - 5655507 | 52996.7 |
| transcriptional regulator, arac family | SAMN06295900_11851 | Not Available | Positive | 5655604 - 5656548 | 35217.0 |
| outer membrane protein (porin) | SAMN06295900_11852 | Not Available | Positive | 5656655 - 5657866 | 41855.0 |
| gamma-glutamylputrescine oxidase | SAMN06295900_11853 | Not Available | Positive | 5658015 - 5659316 | 47737.1 |
| hypothetical protein | SAMN06295900_11854 | Not Available | Positive | 5659348 - 5659716 | 13396.5 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN06295900_11855 | Not Available | Positive | 5659801 - 5660559 | 27596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.