Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11816 | Not Available | Negative | 5614125 - 5615300 | 45223.2 |
| moxr-like atpase | SAMN06295900_11817 | Not Available | Negative | 5615349 - 5616191 | 31783.4 |
| cytochrome c553 | SAMN06295900_11818 | Not Available | Positive | 5616459 - 5616827 | 12880.3 |
| cytochrome c553 | SAMN06295900_11819 | Not Available | Positive | 5616890 - 5617273 | 13325.9 |
| protein of unknown function | SAMN06295900_11820 | Not Available | Negative | 5617410 - 5617841 | 16205.8 |
| eama domain-containing membrane protein rard | SAMN06295900_11821 | Not Available | Positive | 5618125 - 5619057 | 31597.5 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN06295900_11822 | Not Available | Negative | 5619158 - 5619802 | 23807.9 |
| electron transport complex protein rnfb | SAMN06295900_11823 | Not Available | Negative | 5619812 - 5620663 | 29408.0 |
| transcriptional regulator, tetr family | SAMN06295900_11824 | Not Available | Positive | 5620976 - 5621647 | 25410.8 |
| protein of unknown function | SAMN06295900_11825 | Not Available | Negative | 5621680 - 5622147 | 17028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.