Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_1186 | Not Available | Positive | 5602650 - 5602970 | 11661.9 |
| aldehyde dehydrogenase (nad+) | SAMN06295900_1187 | Not Available | Negative | 5603084 - 5604505 | 50583.8 |
| transcriptional regulator, lysr family | SAMN06295900_1188 | Not Available | Positive | 5604604 - 5605503 | 32006.8 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN06295900_1189 | Not Available | Positive | 5605671 - 5607215 | 54871.9 |
| spermidine synthase | SAMN06295900_11810 | Not Available | Positive | 5607316 - 5608278 | 35076.4 |
| protein of unknown function | SAMN06295900_11811 | Not Available | Positive | 5608467 - 5608709 | 9434.46 |
| solute:na+ symporter, sss family | SAMN06295900_11812 | Not Available | Positive | 5608706 - 5610256 | 54875.4 |
| fusaric acid resistance protein family protein | SAMN06295900_11813 | Not Available | Positive | 5610463 - 5611572 | 39720.1 |
| transaldolase | SAMN06295900_11814 | Not Available | Negative | 5611714 - 5612667 | 34905.0 |
| benzoate membrane transport protein | SAMN06295900_11815 | Not Available | Negative | 5612825 - 5614048 | 42142.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.