Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN06295900_117114 | Not Available | Negative | 5583197 - 5583685 | 17886.0 |
| pterin-4-alpha-carbinolamine dehydratase | SAMN06295900_117115 | Not Available | Positive | 5583841 - 5584146 | 11503.6 |
| two component transcriptional regulator, winged helix family | SAMN06295900_117116 | Not Available | Positive | 5584590 - 5585276 | 25635.1 |
| signal transduction histidine kinase | SAMN06295900_117117 | Not Available | Positive | 5585409 - 5586962 | 55440.9 |
| hypothetical protein | SAMN06295900_117118 | Not Available | Negative | 5586995 - 5587456 | 17348.6 |
| transcriptional regulator, marr family | SAMN06295900_117119 | Not Available | Negative | 5587727 - 5588371 | 24120.2 |
| carboxylate-amine ligase | SAMN06295900_117120 | Not Available | Negative | 5588916 - 5590034 | 41724.9 |
| transporter, cpa2 family | SAMN06295900_117121 | Not Available | Negative | 5590102 - 5591304 | 43485.3 |
| hypothetical protein | SAMN06295900_117122 | Not Available | Positive | 5591755 - 5591904 | 5837.18 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN06295900_117123 | Not Available | Negative | 5592174 - 5594141 | 70211.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.