Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase protein i | SAMN06295900_11794 | Not Available | Negative | 5560739 - 5561212 | 17363.3 |
| transporter, ybir family | SAMN06295900_11795 | Not Available | Negative | 5561532 - 5562731 | 42635.5 |
| chromosome segregation dna-binding protein | SAMN06295900_11796 | Not Available | Negative | 5562731 - 5563621 | 31700.5 |
| chromosome segregation atpase | SAMN06295900_11797 | Not Available | Negative | 5563654 - 5564433 | 28025.8 |
| 16s rrna m(7)g-527 methyltransferase | SAMN06295900_11798 | Not Available | Negative | 5564479 - 5565168 | 24606.2 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN06295900_11799 | Not Available | Negative | 5565165 - 5567132 | 71800.8 |
| hypothetical protein | SAMN06295900_117100 | Not Available | Negative | 5567190 - 5567309 | 4240.16 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN06295900_117101 | Not Available | Negative | 5567482 - 5568267 | 27951.2 |
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN06295900_117102 | Not Available | Negative | 5568269 - 5570056 | 64052.2 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN06295900_117103 | Not Available | Negative | 5570061 - 5571116 | 36750.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.