Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclohexadienyl dehydratase | SAMN06295900_11784 | Not Available | Positive | 5550211 - 5551014 | 29127.1 |
| fatty-acyl-coa synthase | SAMN06295900_11785 | Not Available | Negative | 5551655 - 5553385 | 63474.6 |
| atp synthase f1 subcomplex epsilon subunit | SAMN06295900_11786 | Not Available | Negative | 5553753 - 5554178 | 15052.0 |
| atp synthase f1 subcomplex beta subunit | SAMN06295900_11787 | Not Available | Negative | 5554257 - 5555651 | 50679.0 |
| atp synthase f1 subcomplex gamma subunit | SAMN06295900_11788 | Not Available | Negative | 5555707 - 5556582 | 31794.5 |
| atp synthase f1 subcomplex alpha subunit | SAMN06295900_11789 | Not Available | Negative | 5556658 - 5558199 | 55857.0 |
| atp synthase f1 subcomplex delta subunit | SAMN06295900_11790 | Not Available | Negative | 5558255 - 5558794 | 19025.2 |
| atp synthase f0 subcomplex b subunit | SAMN06295900_11791 | Not Available | Negative | 5558797 - 5559267 | 17088.6 |
| f-type h+-transporting atpase subunit c | SAMN06295900_11792 | Not Available | Negative | 5559405 - 5559674 | 9063.7 |
| f-type h+-transporting atpase subunit a | SAMN06295900_11793 | Not Available | Negative | 5559752 - 5560603 | 31057.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.