Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | SAMN06295900_11774 | Not Available | Negative | 5534347 - 5536575 | 78297.8 |
| hypothetical protein | SAMN06295900_11775 | Not Available | Negative | 5536891 - 5537241 | 12923.7 |
| cd2+/zn2+-exporting atpase | SAMN06295900_11776 | Not Available | Negative | 5537402 - 5539609 | 77003.6 |
| transcriptional regulator, merr family | SAMN06295900_11777 | Not Available | Positive | 5539714 - 5540145 | 15793.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_11778 | Not Available | Negative | 5540259 - 5541407 | 40336.6 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN06295900_11779 | Not Available | Negative | 5541492 - 5545433 | 140572.0 |
| hypothetical protein | SAMN06295900_11780 | Not Available | Positive | 5545714 - 5545896 | 6631.26 |
| hypothetical protein | SAMN06295900_11781 | Not Available | Positive | 5546032 - 5546214 | 7011.32 |
| replication restart dna helicase pria | SAMN06295900_11782 | Not Available | Negative | 5546230 - 5548500 | 81443.2 |
| uroporphyrinogen decarboxylase | SAMN06295900_11783 | Not Available | Negative | 5548959 - 5550056 | 39598.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.