Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase trme | SAMN06295900_11764 | Not Available | Positive | 5522163 - 5523566 | 49592.5 |
| protein of unknown function | SAMN06295900_11765 | Not Available | Positive | 5523626 - 5524000 | 13356.4 |
| transcriptional regulator, lysr family | SAMN06295900_11766 | Not Available | Negative | 5524167 - 5525060 | 32799.7 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_11767 | Not Available | Positive | 5525477 - 5526733 | 43306.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_11768 | Not Available | Negative | 5526890 - 5528380 | 51878.3 |
| transcriptional regulator, lysr family | SAMN06295900_11769 | Not Available | Negative | 5528669 - 5529586 | 33903.9 |
| zinc-binding alcohol dehydrogenase family protein | SAMN06295900_11770 | Not Available | Positive | 5529708 - 5530712 | 36222.6 |
| nitroreductase / dihydropteridine reductase | SAMN06295900_11771 | Not Available | Positive | 5530780 - 5531433 | 24101.5 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN06295900_11772 | Not Available | Positive | 5531608 - 5533152 | 55101.4 |
| succinylglutamate desuccinylase / aspartoacylase family protein | SAMN06295900_11773 | Not Available | Positive | 5533348 - 5534325 | 35691.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.