Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | SAMN06295900_11754 | Not Available | Negative | 5509660 - 5510580 | 34399.2 |
| hypothetical protein | SAMN06295900_11755 | Not Available | Negative | 5510656 - 5512392 | 65171.6 |
| dna gyrase subunit b | SAMN06295900_11756 | Not Available | Negative | 5512713 - 5515184 | 91136.9 |
| dna polymerase iii, beta subunit | SAMN06295900_11757 | Not Available | Negative | 5515302 - 5516405 | 40820.7 |
| chromosomal replication initiator protein dnaa | SAMN06295900_11758 | Not Available | Negative | 5516622 - 5518157 | 56752.9 |
| lsu ribosomal protein l34p | SAMN06295900_11759 | Not Available | Positive | 5518627 - 5518761 | 5181.57 |
| ribonuclease p protein component | SAMN06295900_11760 | Not Available | Positive | 5518868 - 5519302 | 15989.3 |
| hypothetical protein | SAMN06295900_11761 | Not Available | Positive | 5519332 - 5519562 | 8464.41 |
| protein translocase subunit yidc | SAMN06295900_11762 | Not Available | Positive | 5519593 - 5521257 | 61325.3 |
| hypothetical protein | SAMN06295900_11763 | Not Available | Negative | 5521391 - 5521813 | 15933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.