Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system secreted protein vgrg | SAMN06295900_11744 | Not Available | Negative | 5494522 - 5497314 | 102315.0 |
| aminoglycoside 6'-n-acetyltransferase i | SAMN06295900_11745 | Not Available | Negative | 5497663 - 5498178 | 18910.7 |
| hypothetical protein | SAMN06295900_11746 | Not Available | Negative | 5498413 - 5499474 | 38699.4 |
| hypothetical protein | SAMN06295900_11747 | Not Available | Negative | 5499981 - 5500469 | 17857.3 |
| protein of unknown function | SAMN06295900_11748 | Not Available | Negative | 5501046 - 5501537 | 16285.5 |
| dna phosphorothioation-associated putative methyltransferase | SAMN06295900_11749 | Not Available | Positive | 5501873 - 5504428 | 96582.9 |
| dna sulfur modification protein dndb | SAMN06295900_11750 | Not Available | Positive | 5504550 - 5505677 | 41933.4 |
| dna sulfur modification protein dndc | SAMN06295900_11751 | Not Available | Positive | 5505674 - 5507146 | 55864.4 |
| dna sulfur modification protein dndd | SAMN06295900_11752 | Not Available | Positive | 5507172 - 5509166 | 73191.2 |
| dna sulfur modification protein dnde | SAMN06295900_11753 | Not Available | Positive | 5509163 - 5509549 | 14350.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.