Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN06295900_11724 | Not Available | Negative | 5472620 - 5473813 | 43151.9 |
| glycerophosphoryl diester phosphodiesterase | SAMN06295900_11725 | Not Available | Positive | 5474078 - 5475028 | 34287.4 |
| two-component system, narl family, captular synthesis response regulator rcsb | SAMN06295900_11726 | Not Available | Positive | 5475667 - 5476305 | 23242.2 |
| hypothetical protein | SAMN06295900_11727 | Not Available | Positive | 5476437 - 5477426 | 37270.2 |
| dj-1/pfpi family protein | SAMN06295900_11728 | Not Available | Negative | 5477458 - 5478060 | 21047.8 |
| transcriptional regulator, gntr family | SAMN06295900_11729 | Not Available | Positive | 5478154 - 5479494 | 47664.0 |
| uncharacterized protein yukj | SAMN06295900_11730 | Not Available | Negative | 5479528 - 5480196 | 24363.4 |
| hypothetical protein | SAMN06295900_11731 | Not Available | Negative | 5480208 - 5480789 | 22031.5 |
| curli biogenesis system outer membrane secretion channel csgg | SAMN06295900_11732 | Not Available | Positive | 5480846 - 5481520 | 23772.4 |
| hypothetical protein | SAMN06295900_11733 | Not Available | Positive | 5481631 - 5481993 | 13366.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.