Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase (nadph) | SAMN06295900_116153 | Not Available | Positive | 5435534 - 5436610 | 37794.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN06295900_116154 | Not Available | Positive | 5436707 - 5437177 | 16551.7 |
| aromatic amino acid:proton symporter, aat family | SAMN06295900_116155 | Not Available | Positive | 5437212 - 5438669 | 52053.9 |
| hypothetical protein | SAMN06295900_116156 | Not Available | Negative | 5438719 - 5439039 | 11701.4 |
| h+/cl-antiporter clca | SAMN06295900_116157 | Not Available | Negative | 5439530 - 5441317 | 62707.9 |
| transcriptional regulator, marr family | SAMN06295900_116158 | Not Available | Negative | 5441331 - 5441747 | 15783.1 |
| cbs domain-containing membrane protein | SAMN06295900_116159 | Not Available | Negative | 5441850 - 5443010 | 41267.4 |
| hypothetical protein | SAMN06295900_116160 | Not Available | Negative | 5443408 - 5444757 | 50259.4 |
| hypothetical protein | SAMN06295900_116161 | Not Available | Positive | 5445277 - 5445494 | 6632.9 |
| hypothetical protein | SAMN06295900_1171 | Not Available | Positive | 5445977 - 5447377 | 53461.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.