Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein imua | SAMN06295900_116143 | Not Available | Positive | 5422189 - 5422914 | 25600.3 |
| protein imub | SAMN06295900_116144 | Not Available | Positive | 5422868 - 5424313 | 53232.7 |
| error-prone dna polymerase, dnae-like | SAMN06295900_116145 | Not Available | Positive | 5424329 - 5427469 | 116298.0 |
| outer membrane lipoprotein slyb | SAMN06295900_116146 | Not Available | Negative | 5427579 - 5428145 | 19230.7 |
| protein of unknown function | SAMN06295900_116147 | Not Available | Positive | 5428433 - 5428792 | 11910.8 |
| iron complex outermembrane recepter protein | SAMN06295900_116148 | Not Available | Positive | 5428830 - 5431253 | 88339.9 |
| hypothetical protein | SAMN06295900_116149 | Not Available | Positive | 5431268 - 5432620 | 48956.5 |
| hypothetical protein | SAMN06295900_116150 | Not Available | Positive | 5432617 - 5433144 | 19262.4 |
| hypothetical protein | SAMN06295900_116151 | Not Available | Negative | 5433129 - 5433713 | 19552.8 |
| outer membrane protein (porin) | SAMN06295900_116152 | Not Available | Positive | 5434258 - 5435364 | 38544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.