Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11693 | Not Available | Negative | 5371648 - 5372082 | 15032.4 |
| dmso/tmao reductase yedyz, molybdopterin-dependent catalytic subunit | SAMN06295900_11694 | Not Available | Negative | 5372096 - 5373340 | 45951.0 |
| copper-(or silver)-translocating p-type atpase | SAMN06295900_11695 | Not Available | Negative | 5373337 - 5375619 | 79455.1 |
| cytochrome c, mono-and diheme variants | SAMN06295900_11696 | Not Available | Negative | 5375633 - 5376226 | 20135.9 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN06295900_11697 | Not Available | Negative | 5376223 - 5376822 | 21505.9 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN06295900_11698 | Not Available | Negative | 5376824 - 5378512 | 61323.4 |
| transcriptional regulator, xre family | SAMN06295900_11699 | Not Available | Negative | 5378925 - 5379770 | 30478.3 |
| hypothetical protein | SAMN06295900_116100 | Not Available | Negative | 5379873 - 5380499 | 22508.4 |
| cell division protease ftsh | SAMN06295900_116101 | Not Available | Positive | 5381026 - 5382870 | 66154.0 |
| invasion protein b family protein | SAMN06295900_116102 | Not Available | Negative | 5382883 - 5383287 | 14812.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.