Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN06295900_11683 | Not Available | Positive | 5362222 - 5362608 | 13739.7 |
| pas domain s-box-containing protein | SAMN06295900_11684 | Not Available | Positive | 5362708 - 5364243 | 55938.3 |
| two component transcriptional regulator, luxr family | SAMN06295900_11685 | Not Available | Positive | 5364233 - 5364913 | 24816.0 |
| transcriptional regulator, arac family | SAMN06295900_11686 | Not Available | Positive | 5365164 - 5366123 | 35091.0 |
| protein of unknown function | SAMN06295900_11687 | Not Available | Positive | 5366193 - 5366570 | 13487.3 |
| hypothetical protein | SAMN06295900_11688 | Not Available | Negative | 5366830 - 5367186 | 12935.4 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_11689 | Not Available | Negative | 5367207 - 5368157 | 34597.8 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_11690 | Not Available | Negative | 5368412 - 5369386 | 35472.9 |
| protein of unknown function | SAMN06295900_11691 | Not Available | Negative | 5369603 - 5369950 | 11679.7 |
| acetyl esterase/lipase | SAMN06295900_11692 | Not Available | Positive | 5370488 - 5371543 | 37892.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.