Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-2 c20-methyltransferase /cobalt-factor ii c20-methyltransferase | SAMN06295900_11642 | Not Available | Negative | 5312884 - 5313615 | 26493.2 |
| precorrin-8x methylmutase | SAMN06295900_11643 | Not Available | Negative | 5313612 - 5314238 | 21438.9 |
| precorrin-3b synthase | SAMN06295900_11644 | Not Available | Negative | 5314231 - 5315895 | 58572.9 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN06295900_11646 | Not Available | Positive | 5316108 - 5317382 | 44520.7 |
| cobalt-precorrin-5b (c1)-methyltransferase | SAMN06295900_11647 | Not Available | Positive | 5317363 - 5318460 | 37828.4 |
| precorrin-6a reductase | SAMN06295900_11648 | Not Available | Positive | 5318457 - 5319194 | 26542.8 |
| precorrin-4/cobalt-precorrin-4 c11-methyltransferase | SAMN06295900_11649 | Not Available | Positive | 5319309 - 5320034 | 25676.1 |
| mandelate racemase | SAMN06295900_11650 | Not Available | Negative | 5320133 - 5321218 | 39107.2 |
| uncharacterized membrane protein | SAMN06295900_11651 | Not Available | Negative | 5321274 - 5322200 | 32786.1 |
| lipocalin-like domain-containing protein | SAMN06295900_11652 | Not Available | Negative | 5322281 - 5322799 | 18627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.