Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, duf1810 family | SAMN06295900_11632 | Not Available | Negative | 5299300 - 5299755 | 16810.0 |
| hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase | SAMN06295900_11633 | Not Available | Negative | 5299916 - 5301220 | 45227.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN06295900_11634 | Not Available | Negative | 5301223 - 5301825 | 22278.8 |
| cobalt-precorrin 5a hydrolase | SAMN06295900_11635 | Not Available | Negative | 5301822 - 5302322 | 16720.2 |
| high-affinity nickel-transport protein | SAMN06295900_11636 | Not Available | Positive | 5302924 - 5304012 | 39500.6 |
| cobalamin biosynthesis protein cobw | SAMN06295900_11637 | Not Available | Positive | 5304068 - 5305150 | 39127.5 |
| cobaltochelatase cobn subunit | SAMN06295900_11638 | Not Available | Positive | 5305199 - 5309038 | 140423.0 |
| protoporphyrin ix magnesium-chelatase | SAMN06295900_11639 | Not Available | Positive | 5309035 - 5310156 | 39884.2 |
| magnesium chelatase subunit chld-like protein | SAMN06295900_11640 | Not Available | Positive | 5310246 - 5310845 | 21590.2 |
| precorrin-3 methyltransferase | SAMN06295900_11641 | Not Available | Negative | 5311058 - 5312896 | 63535.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.