Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase (amp-forming) | SAMN06295900_11612 | Not Available | Negative | 5276766 - 5278280 | 54117.8 |
| hypothetical protein | SAMN06295900_11613 | Not Available | Negative | 5278277 - 5279230 | 35189.4 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN06295900_11614 | Not Available | Negative | 5279242 - 5279862 | 22064.5 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN06295900_11615 | Not Available | Negative | 5279859 - 5280710 | 31045.0 |
| phosphinothricin acetyltransferase | SAMN06295900_11616 | Not Available | Negative | 5280677 - 5281180 | 18588.1 |
| hypothetical protein | SAMN06295900_11617 | Not Available | Negative | 5281170 - 5281727 | 20076.9 |
| cysteine dioxygenase type i | SAMN06295900_11618 | Not Available | Negative | 5281717 - 5282391 | 24591.0 |
| transporter, cpa2 family | SAMN06295900_11619 | Not Available | Negative | 5282447 - 5283709 | 44084.5 |
| phosphopantetheine attachment site | SAMN06295900_11620 | Not Available | Negative | 5283746 - 5283997 | 9335.07 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN06295900_11621 | Not Available | Negative | 5284033 - 5284965 | 33858.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.