Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN06295900_1162 | Not Available | Positive | 5267774 - 5268292 | 19486.3 |
| hypothetical protein | SAMN06295900_1163 | Not Available | Negative | 5268323 - 5269492 | 42584.6 |
| hypothetical protein | SAMN06295900_1164 | Not Available | Positive | 5269718 - 5270038 | 11519.3 |
| 3-hydroxypropanoate dehydrogenase | SAMN06295900_1165 | Not Available | Negative | 5270084 - 5270800 | 25958.9 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN06295900_1166 | Not Available | Negative | 5270781 - 5271599 | 29842.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_1167 | Not Available | Positive | 5272087 - 5272860 | 27407.0 |
| nitronate monooxygenase | SAMN06295900_1168 | Not Available | Positive | 5273036 - 5274136 | 37794.2 |
| hypothetical protein | SAMN06295900_1169 | Not Available | Negative | 5274168 - 5275439 | 43999.3 |
| hypothetical protein | SAMN06295900_11610 | Not Available | Negative | 5275467 - 5276450 | 36438.9 |
| acyl carrier protein | SAMN06295900_11611 | Not Available | Negative | 5276450 - 5276713 | 9537.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.