Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_115137 | Not Available | Negative | 5247766 - 5248002 | 8605.23 |
| osmotically-inducible protein osmy, contains bon domain | SAMN06295900_115138 | Not Available | Negative | 5248064 - 5248714 | 23461.9 |
| membrane associated serine protease, rhomboid family | SAMN06295900_115139 | Not Available | Positive | 5248877 - 5249476 | 21284.6 |
| universal stress protein family protein | SAMN06295900_115140 | Not Available | Positive | 5249562 - 5250401 | 29925.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN06295900_115141 | Not Available | Positive | 5250451 - 5251275 | 29790.5 |
| transposase | SAMN06295900_115142 | Not Available | Negative | 5251383 - 5251733 | 12989.8 |
| hypothetical protein | SAMN06295900_115143 | Not Available | Negative | 5251758 - 5252006 | 9098.68 |
| hypothetical protein | SAMN06295900_115144 | Not Available | Negative | 5252071 - 5252718 | 23802.2 |
| hypothetical protein | SAMN06295900_115145 | Not Available | Negative | 5252732 - 5253091 | 12716.0 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN06295900_115146 | Not Available | Negative | 5253111 - 5253488 | 13892.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.