Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN06295900_115127 | Not Available | Positive | 5237120 - 5237524 | 14613.8 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06295900_115128 | Not Available | Negative | 5237543 - 5239021 | 53227.6 |
| membrane protease ftsh catalytic subunit | SAMN06295900_115129 | Not Available | Negative | 5239209 - 5241119 | 68740.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN06295900_115130 | Not Available | Negative | 5241199 - 5241663 | 16659.0 |
| bon domain-containing protein | SAMN06295900_115131 | Not Available | Negative | 5241727 - 5242422 | 24747.9 |
| osmotically-inducible protein osmy, contains bon domain | SAMN06295900_115132 | Not Available | Negative | 5242666 - 5243316 | 22758.3 |
| hypothetical protein | SAMN06295900_115133 | Not Available | Positive | 5243476 - 5244423 | 35483.0 |
| hypothetical protein | SAMN06295900_115134 | Not Available | Positive | 5244647 - 5244847 | 7192.4 |
| metallo-beta-lactamase family protein | SAMN06295900_115135 | Not Available | Positive | 5244870 - 5246276 | 50689.0 |
| phosphatidylserine decarboxylase | SAMN06295900_115136 | Not Available | Positive | 5246493 - 5247749 | 46332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.