Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_11587 | Not Available | Negative | 5197774 - 5198664 | 33048.2 |
| major facilitator superfamily protein | SAMN06295900_11588 | Not Available | Positive | 5198795 - 5200348 | 52904.3 |
| cellulose binding domain-containing protein | SAMN06295900_11589 | Not Available | Positive | 5200432 - 5201175 | 25536.5 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06295900_11590 | Not Available | Negative | 5201298 - 5201936 | 22682.3 |
| transcriptional regulator, arac family | SAMN06295900_11591 | Not Available | Positive | 5202239 - 5203081 | 31434.7 |
| ala-trna(pro) hydrolase | SAMN06295900_11592 | Not Available | Positive | 5203202 - 5203927 | 26173.4 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN06295900_11593 | Not Available | Negative | 5203996 - 5205003 | 35370.4 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN06295900_11594 | Not Available | Negative | 5205155 - 5206171 | 35247.4 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN06295900_11595 | Not Available | Negative | 5206164 - 5207222 | 36469.2 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN06295900_11596 | Not Available | Negative | 5207219 - 5208754 | 54688.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.