Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN06295900_11567 | Not Available | Negative | 5176677 - 5177237 | 19922.6 |
| hypothetical protein | SAMN06295900_11568 | Not Available | Positive | 5177349 - 5178143 | 27973.4 |
| protein of unknown function | SAMN06295900_11569 | Not Available | Positive | 5178488 - 5179726 | 44655.6 |
| hypothetical protein | SAMN06295900_11570 | Not Available | Negative | 5179823 - 5179939 | 4347.46 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN06295900_11571 | Not Available | Negative | 5180024 - 5181088 | 41320.6 |
| hypothetical protein | SAMN06295900_11572 | Not Available | Negative | 5181283 - 5181426 | 5361.63 |
| transcriptional regulator, arac family | SAMN06295900_11573 | Not Available | Positive | 5181672 - 5182214 | 19973.0 |
| catechol 2,3-dioxygenase | SAMN06295900_11574 | Not Available | Positive | 5182211 - 5182627 | 15268.1 |
| methyl-accepting chemotaxis protein | SAMN06295900_11575 | Not Available | Positive | 5183142 - 5184815 | 58399.6 |
| purine-binding chemotaxis protein chew | SAMN06295900_11576 | Not Available | Positive | 5184831 - 5185370 | 18983.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.