Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN06295900_11527 | Not Available | Positive | 5126000 - 5127250 | 44389.1 |
| res domain-containing protein | SAMN06295900_11528 | Not Available | Negative | 5127260 - 5127781 | 19085.9 |
| hypothetical protein | SAMN06295900_11529 | Not Available | Negative | 5127778 - 5128185 | 14958.8 |
| outer membrane protein, multidrug efflux system | SAMN06295900_11530 | Not Available | Negative | 5128362 - 5129900 | 54726.5 |
| multidrug efflux pump | SAMN06295900_11531 | Not Available | Negative | 5129915 - 5133133 | 115342.0 |
| membrane fusion protein, multidrug efflux system | SAMN06295900_11532 | Not Available | Negative | 5133177 - 5134397 | 42817.7 |
| acetyl esterase/lipase | SAMN06295900_11533 | Not Available | Negative | 5134440 - 5135288 | 30515.2 |
| transcriptional regulator, lysr family | SAMN06295900_11534 | Not Available | Positive | 5135470 - 5136474 | 37282.0 |
| protein of unknown function | SAMN06295900_11535 | Not Available | Positive | 5136932 - 5137225 | 10119.8 |
| hypothetical protein | SAMN06295900_11536 | Not Available | Positive | 5137266 - 5137457 | 7024.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.