Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp-binding cassette transporter | SAMN06295900_114161 | Not Available | Positive | 5068840 - 5070519 | 61684.4 |
| iron complex transport system atp-binding protein | SAMN06295900_114162 | Not Available | Positive | 5070516 - 5071334 | 29340.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN06295900_114163 | Not Available | Positive | 5071571 - 5075110 | 127144.0 |
| amino acid adenylation domain-containing protein | SAMN06295900_114164 | Not Available | Positive | 5075123 - 5085180 | 359791.0 |
| immunity protein imm2 | SAMN06295900_1151 | Not Available | Negative | 5085699 - 5085962 | 9784.79 |
| filamentous hemagglutinin | SAMN06295900_1152 | Not Available | Negative | 5086062 - 5095868 | 321490.0 |
| hemolysin activation/secretion protein | SAMN06295900_1153 | Not Available | Negative | 5095865 - 5097733 | 68691.5 |
| 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase | SAMN06295900_1154 | Not Available | Negative | 5098451 - 5099257 | 28367.7 |
| benzoate/toluate 1,2-dioxygenase reductase subunit | SAMN06295900_1155 | Not Available | Negative | 5099254 - 5100273 | 36916.6 |
| benzoate 1,2-dioxygenase, beta subunit | SAMN06295900_1156 | Not Available | Negative | 5100334 - 5100825 | 19537.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.