Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical phage tail region protein | SAMN06295900_114131 | Not Available | Positive | 5035859 - 5036314 | 16993.1 |
| hypothetical protein | SAMN06295900_114132 | Not Available | Positive | 5036336 - 5036725 | 14438.2 |
| conserved hypothetical phage tail region protein | SAMN06295900_114133 | Not Available | Positive | 5036938 - 5037540 | 21764.4 |
| hypothetical protein | SAMN06295900_114134 | Not Available | Positive | 5037543 - 5039012 | 53980.2 |
| hypothetical protein | SAMN06295900_114135 | Not Available | Positive | 5039012 - 5039731 | 26084.2 |
| phage protein d | SAMN06295900_114136 | Not Available | Positive | 5039724 - 5041004 | 44135.7 |
| hypothetical protein | SAMN06295900_114137 | Not Available | Positive | 5041001 - 5041543 | 19602.2 |
| hypothetical protein | SAMN06295900_114138 | Not Available | Positive | 5041544 - 5041993 | 15860.8 |
| hypothetical protein | SAMN06295900_114139 | Not Available | Positive | 5041993 - 5042385 | 14572.7 |
| putative baseplate assembly protein | SAMN06295900_114140 | Not Available | Positive | 5042393 - 5045422 | 106631.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.