Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma54 specific transcriptional regulator, fis family | SAMN06295900_114111 | Not Available | Positive | 5014302 - 5015693 | 51028.2 |
| protein of unknown function | SAMN06295900_114112 | Not Available | Positive | 5015772 - 5016533 | 27473.5 |
| transcriptional regulator, gntr family | SAMN06295900_114113 | Not Available | Negative | 5016577 - 5017200 | 23234.9 |
| hypothetical protein | SAMN06295900_114114 | Not Available | Negative | 5017343 - 5017507 | 5656.22 |
| hypothetical protein | SAMN06295900_114115 | Not Available | Positive | 5017797 - 5018045 | 9788.69 |
| host factor-i protein | SAMN06295900_114116 | Not Available | Negative | 5018166 - 5018645 | 17508.3 |
| long-chain acyl-coa synthetase | SAMN06295900_114117 | Not Available | Negative | 5019219 - 5020991 | 64176.9 |
| acyl-coa dehydrogenase | SAMN06295900_114118 | Not Available | Negative | 5020988 - 5023561 | 92110.2 |
| transcriptional regulator, tetr family | SAMN06295900_114119 | Not Available | Negative | 5023611 - 5024480 | 30877.7 |
| mfs transporter, shs family, lactate transporter | SAMN06295900_114120 | Not Available | Negative | 5024747 - 5025967 | 43969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.