Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nusa antitermination factor | SAMN06295900_11480 | Not Available | Positive | 4975584 - 4977059 | 55189.9 |
| bacterial translation initiation factor 2 (bif-2) | SAMN06295900_11481 | Not Available | Positive | 4977235 - 4980126 | 103469.0 |
| ribosome-binding factor a | SAMN06295900_11482 | Not Available | Positive | 4980258 - 4980626 | 13782.5 |
| trna pseudouridine synthase b | SAMN06295900_11483 | Not Available | Positive | 4980717 - 4981676 | 33966.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN06295900_11484 | Not Available | Negative | 4981779 - 4983347 | 55640.4 |
| membrane fusion protein, multidrug efflux system | SAMN06295900_11485 | Not Available | Negative | 4983385 - 4984638 | 44396.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295900_11486 | Not Available | Negative | 4984731 - 4986236 | 53174.9 |
| transcriptional regulator, marr family | SAMN06295900_11487 | Not Available | Negative | 4986379 - 4986864 | 17335.0 |
| gtp-binding protein | SAMN06295900_11488 | Not Available | Positive | 4987139 - 4988965 | 67561.1 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN06295900_11490 | Not Available | Positive | 4989281 - 4992136 | 106089.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.