Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein-2, aspartate sensor receptor | SAMN06295900_11460 | Not Available | Negative | 4955099 - 4957099 | 69929.2 |
| uncharacterized conserved protein | SAMN06295900_11461 | Not Available | Positive | 4957611 - 4957979 | 13573.2 |
| hypothetical protein | SAMN06295900_11462 | Not Available | Positive | 4957976 - 4958104 | 4694.91 |
| two component transcriptional regulator, winged helix family | SAMN06295900_11463 | Not Available | Positive | 4958115 - 4958855 | 27832.9 |
| signal transduction histidine kinase | SAMN06295900_11464 | Not Available | Positive | 4958852 - 4960174 | 48192.4 |
| cytochrome c biogenesis protein ccda | SAMN06295900_11465 | Not Available | Positive | 4960363 - 4962135 | 61937.5 |
| cupin domain-containing protein | SAMN06295900_11466 | Not Available | Negative | 4962257 - 4962643 | 14508.1 |
| transcriptional regulator, lysr family | SAMN06295900_11467 | Not Available | Positive | 4962802 - 4963722 | 33002.1 |
| hypothetical protein | SAMN06295900_11468 | Not Available | Positive | 4964399 - 4964803 | 13817.8 |
| hypothetical protein | SAMN06295900_11469 | Not Available | Positive | 4965381 - 4965782 | 13525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.