Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acids transporter | SAMN06295900_11450 | Not Available | Negative | 4944749 - 4946158 | 49268.9 |
| organic hydroperoxide reductase osmc/ohra | SAMN06295900_11451 | Not Available | Positive | 4946654 - 4947130 | 17290.4 |
| hypothetical protein | SAMN06295900_11452 | Not Available | Positive | 4947221 - 4947868 | 22552.6 |
| thioredoxin 1 | SAMN06295900_11453 | Not Available | Positive | 4947990 - 4948316 | 11646.0 |
| hypothetical protein | SAMN06295900_11454 | Not Available | Negative | 4948342 - 4948569 | 8164.37 |
| fructuronate reductase | SAMN06295900_11455 | Not Available | Negative | 4948688 - 4950166 | 52811.8 |
| d-mannonate dehydratase | SAMN06295900_11456 | Not Available | Positive | 4950415 - 4951623 | 44786.6 |
| l-idonate 5-dehydrogenase | SAMN06295900_11457 | Not Available | Positive | 4951643 - 4952680 | 36623.2 |
| d-galactonate transporter | SAMN06295900_11458 | Not Available | Positive | 4952810 - 4954102 | 45461.9 |
| dna-binding transcriptional regulator, gntr family | SAMN06295900_11459 | Not Available | Positive | 4954096 - 4954983 | 32988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.