Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11430 | Not Available | Negative | 4922996 - 4923409 | 14481.8 |
| transcriptional regulator, arac family | SAMN06295900_11431 | Not Available | Negative | 4923523 - 4924599 | 39188.4 |
| ethanolamine ammonia-lyase light chain | SAMN06295900_11432 | Not Available | Negative | 4924877 - 4925668 | 27959.4 |
| ethanolamine ammonia-lyase heavy chain | SAMN06295900_11433 | Not Available | Negative | 4925676 - 4927067 | 49861.8 |
| ethanolamine:proton symporter, eat family | SAMN06295900_11434 | Not Available | Negative | 4927119 - 4928522 | 50429.9 |
| cbs domain-containing protein | SAMN06295900_11435 | Not Available | Positive | 4928813 - 4929511 | 25789.1 |
| protein of unknown function | SAMN06295900_11436 | Not Available | Negative | 4929606 - 4929932 | 11477.8 |
| glyoxylase i family protein | SAMN06295900_11437 | Not Available | Positive | 4930064 - 4930471 | 15473.4 |
| hypothetical protein | SAMN06295900_11438 | Not Available | Negative | 4930598 - 4930750 | 5097.79 |
| bon domain-containing protein | SAMN06295900_11439 | Not Available | Positive | 4930860 - 4931450 | 21286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.