Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | SAMN06295900_11420 | Not Available | Negative | 4913124 - 4914095 | 36944.6 |
| hypothetical protein | SAMN06295900_11421 | Not Available | Positive | 4914260 - 4914367 | 3543.4 |
| f subunit of k+-transporting atpase (potass_kdpf) | SAMN06295900_11422 | Not Available | Positive | 4914364 - 4914459 | 3466.35 |
| k+-transporting atpase atpase a chain | SAMN06295900_11423 | Not Available | Positive | 4914456 - 4916264 | 62805.3 |
| k+-transporting atpase atpase b chain | SAMN06295900_11424 | Not Available | Positive | 4916281 - 4918428 | 75499.5 |
| k+-transporting atpase atpase c chain | SAMN06295900_11425 | Not Available | Positive | 4918481 - 4919062 | 19931.8 |
| cu and ag efflux protein cusf | SAMN06295900_11426 | Not Available | Negative | 4919248 - 4919589 | 11742.4 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN06295900_11427 | Not Available | Negative | 4919720 - 4921015 | 47427.3 |
| outer membrane protein tolc | SAMN06295900_11428 | Not Available | Negative | 4921017 - 4922528 | 53767.3 |
| hypothetical protein | SAMN06295900_11429 | Not Available | Negative | 4922549 - 4922908 | 11830.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.