Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN06295900_11410 | Not Available | Positive | 4903502 - 4904449 | 35326.6 |
| l-iditol 2-dehydrogenase | SAMN06295900_11411 | Not Available | Negative | 4904471 - 4905571 | 39838.2 |
| short-chain dehydrogenase | SAMN06295900_11412 | Not Available | Negative | 4905711 - 4906457 | 25561.0 |
| dna-binding transcriptional regulator lsrr, deor family | SAMN06295900_11413 | Not Available | Negative | 4906470 - 4907450 | 35155.1 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN06295900_11414 | Not Available | Negative | 4907521 - 4908402 | 32581.0 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN06295900_11415 | Not Available | Negative | 4908399 - 4909337 | 34595.0 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN06295900_11416 | Not Available | Negative | 4909373 - 4910725 | 49941.0 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN06295900_11417 | Not Available | Positive | 4910975 - 4912096 | 40822.5 |
| conserved hypothetical protein | SAMN06295900_11418 | Not Available | Negative | 4912173 - 4912628 | 17575.8 |
| hypothetical protein | SAMN06295900_11419 | Not Available | Positive | 4912850 - 4913146 | 10976.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.