Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | SAMN06295900_113177 | Not Available | Negative | 4889540 - 4891714 | 79213.1 |
| hypothetical protein | SAMN06295900_1141 | Not Available | Positive | 4892456 - 4892565 | 3671.31 |
| hypothetical protein | SAMN06295900_1142 | Not Available | Positive | 4893559 - 4894158 | 22047.3 |
| toxic protein syme | SAMN06295900_1143 | Not Available | Negative | 4894201 - 4894482 | 10876.0 |
| site-specific recombinase xerd | SAMN06295900_1144 | Not Available | Positive | 4895102 - 4896487 | 52383.8 |
| rhh-type transcriptional regulator, rel operon repressor / antitoxin relb | SAMN06295900_1145 | Not Available | Positive | 4896810 - 4897034 | 8457.11 |
| hypothetical protein | SAMN06295900_1146 | Not Available | Negative | 4897380 - 4897658 | 10686.9 |
| catecholate siderophore receptor | SAMN06295900_1147 | Not Available | Negative | 4898413 - 4900557 | 78115.9 |
| nucleobase:cation symporter-1, ncs1 family | SAMN06295900_1148 | Not Available | Positive | 4900965 - 4902440 | 53028.0 |
| 3-oxoadipate enol-lactonase | SAMN06295900_1149 | Not Available | Negative | 4902475 - 4903278 | 29438.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.