Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyltransferase | SAMN06295900_113157 | Not Available | Negative | 4865368 - 4867119 | 64640.9 |
| transglutaminase-like superfamily protein | SAMN06295900_113158 | Not Available | Negative | 4867175 - 4868074 | 34322.8 |
| acyl carrier protein | SAMN06295900_113159 | Not Available | Positive | 4868472 - 4868774 | 10601.5 |
| hypothetical protein | SAMN06295900_113160 | Not Available | Positive | 4868797 - 4869873 | 37847.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN06295900_113161 | Not Available | Positive | 4869884 - 4870855 | 35239.4 |
| na+-driven multidrug efflux pump | SAMN06295900_113162 | Not Available | Positive | 4870852 - 4872210 | 46779.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN06295900_113163 | Not Available | Positive | 4872207 - 4873787 | 55992.2 |
| acyl-coa dehydrogenase, c-terminal domain | SAMN06295900_113164 | Not Available | Positive | 4873829 - 4874575 | 26628.0 |
| hypothetical protein | SAMN06295900_113165 | Not Available | Positive | 4874575 - 4875645 | 38715.9 |
| acyl-coa dehydrogenase | SAMN06295900_113166 | Not Available | Positive | 4875656 - 4876870 | 43317.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.