Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_113147 | Not Available | Positive | 4852380 - 4852919 | 19350.4 |
| cation diffusion facilitator family transporter | SAMN06295900_113148 | Not Available | Positive | 4853055 - 4854089 | 36519.2 |
| alcohol dehydrogenase | SAMN06295900_113149 | Not Available | Negative | 4854174 - 4855214 | 36658.0 |
| hypothetical protein | SAMN06295900_113150 | Not Available | Negative | 4855286 - 4857292 | 69319.6 |
| ubiquitin family protein | SAMN06295900_113151 | Not Available | Negative | 4857596 - 4859725 | 76054.5 |
| hypothetical protein | SAMN06295900_113152 | Not Available | Negative | 4860034 - 4860522 | 17922.4 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN06295900_113153 | Not Available | Negative | 4860790 - 4862130 | 46969.3 |
| d-amino-acid:oxygen oxidoreductase | SAMN06295900_113154 | Not Available | Negative | 4862475 - 4863611 | 41875.3 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN06295900_113155 | Not Available | Negative | 4863799 - 4864368 | 20278.1 |
| ketopantoate reductase | SAMN06295900_113156 | Not Available | Negative | 4864412 - 4865332 | 32069.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.