Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb family protein | SAMN06295900_113137 | Not Available | Positive | 4840869 - 4841930 | 39754.4 |
| initiator replication protein | SAMN06295900_113138 | Not Available | Negative | 4842079 - 4843428 | 50529.3 |
| replication region dna-binding n-term | SAMN06295900_113139 | Not Available | Positive | 4845320 - 4846525 | 44082.0 |
| protein of unknown function | SAMN06295900_113140 | Not Available | Negative | 4846621 - 4847004 | 14137.7 |
| transcriptional regulator, xre family with cupin sensor | SAMN06295900_113141 | Not Available | Negative | 4847075 - 4847686 | 21730.8 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN06295900_113142 | Not Available | Positive | 4847863 - 4849062 | 43226.6 |
| l-threonine 3-dehydrogenase | SAMN06295900_113143 | Not Available | Positive | 4849076 - 4850107 | 37489.5 |
| polyisoprenoid-binding protein ycei | SAMN06295900_113144 | Not Available | Negative | 4850161 - 4850823 | 23895.4 |
| transcriptional regulator, tetr family | SAMN06295900_113145 | Not Available | Positive | 4851007 - 4851657 | 23892.6 |
| hypothetical protein | SAMN06295900_113146 | Not Available | Positive | 4851675 - 4852163 | 19190.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.