Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | SAMN06295900_113117 | Not Available | Negative | 4815283 - 4816542 | 45199.3 |
| adp-ribosyltransferase exoenzyme | SAMN06295900_113118 | Not Available | Positive | 4817033 - 4818820 | 62993.3 |
| uncharacterized short protein ybdd, duf466 family | SAMN06295900_113119 | Not Available | Negative | 4818955 - 4819158 | 7547.07 |
| carbon starvation protein | SAMN06295900_113120 | Not Available | Negative | 4819182 - 4821266 | 74286.3 |
| two-component system, narl family, sensor kinase | SAMN06295900_113121 | Not Available | Positive | 4821468 - 4822898 | 51510.0 |
| two component transcriptional regulator, luxr family | SAMN06295900_113122 | Not Available | Positive | 4822895 - 4823551 | 23725.8 |
| abc-type transporter mla maintaining outer membrane lipid asymmetry, mlac component | SAMN06295900_113123 | Not Available | Negative | 4823566 - 4824162 | 21637.8 |
| hypothetical protein | SAMN06295900_113124 | Not Available | Positive | 4824517 - 4827135 | 91821.4 |
| phospholipid-binding lipoprotein mlaa | SAMN06295900_113125 | Not Available | Positive | 4827145 - 4828032 | 30786.3 |
| hopanoid-associated phosphorylase | SAMN06295900_113126 | Not Available | Negative | 4828124 - 4828819 | 23867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.