Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN06295900_113107 | Not Available | Negative | 4804788 - 4805168 | 13969.6 |
| acetoin utilization deacetylase acuc | SAMN06295900_113108 | Not Available | Negative | 4805355 - 4806443 | 39813.7 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN06295900_113109 | Not Available | Negative | 4806467 - 4807726 | 44158.5 |
| sugar transporter | SAMN06295900_113110 | Not Available | Negative | 4807752 - 4809062 | 46435.6 |
| transcriptional regulator, lysr family | SAMN06295900_113111 | Not Available | Positive | 4809279 - 4810235 | 36531.0 |
| hypothetical protein | SAMN06295900_113112 | Not Available | Positive | 4810379 - 4810789 | 14690.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_113113 | Not Available | Negative | 4811083 - 4812015 | 34957.0 |
| hypothetical protein | SAMN06295900_113114 | Not Available | Positive | 4812346 - 4813296 | 34287.3 |
| transcriptional regulator, xre family with cupin sensor | SAMN06295900_113115 | Not Available | Positive | 4813440 - 4814057 | 22506.8 |
| ornithine cyclodeaminase | SAMN06295900_113116 | Not Available | Negative | 4814283 - 4815227 | 33218.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.