Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_11397 | Not Available | Positive | 4795739 - 4796572 | 30488.6 |
| amino acid abc transporter membrane protein 1, paat family | SAMN06295900_11398 | Not Available | Positive | 4796609 - 4797325 | 25901.3 |
| amino acid abc transporter membrane protein 2, paat family | SAMN06295900_11399 | Not Available | Positive | 4797348 - 4797998 | 23506.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN06295900_113100 | Not Available | Positive | 4797995 - 4798747 | 27263.0 |
| transcriptional regulator, iclr family | SAMN06295900_113101 | Not Available | Positive | 4798877 - 4799638 | 28454.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_113102 | Not Available | Negative | 4799595 - 4800383 | 28576.7 |
| methyltransferase domain-containing protein | SAMN06295900_113103 | Not Available | Negative | 4800418 - 4801005 | 21381.3 |
| undecaprenyl-diphosphatase | SAMN06295900_113104 | Not Available | Negative | 4801167 - 4801769 | 21497.9 |
| dna-binding transcriptional regulator, xre family | SAMN06295900_113105 | Not Available | Positive | 4801985 - 4802275 | 10110.3 |
| serine/threonine-protein kinase hipa | SAMN06295900_113106 | Not Available | Positive | 4802272 - 4803573 | 46505.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.