Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN06295900_11377 | Not Available | Negative | 4775858 - 4776553 | 25457.7 |
| rnd family efflux transporter, mfp subunit | SAMN06295900_11378 | Not Available | Negative | 4776590 - 4777855 | 44164.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295900_11379 | Not Available | Negative | 4777913 - 4779445 | 54057.9 |
| endonuclease g | SAMN06295900_11380 | Not Available | Positive | 4779811 - 4780563 | 27163.7 |
| hypothetical protein | SAMN06295900_11381 | Not Available | Positive | 4780556 - 4780822 | 9307.79 |
| uncharacterized membrane protein ygl010w | SAMN06295900_11382 | Not Available | Positive | 4780951 - 4781475 | 18626.0 |
| chloramphenicol-sensitive protein rard | SAMN06295900_11383 | Not Available | Negative | 4781568 - 4782458 | 31815.2 |
| acylphosphatase | SAMN06295900_11384 | Not Available | Negative | 4782662 - 4782958 | 11125.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_11385 | Not Available | Positive | 4783113 - 4785815 | 99919.2 |
| dihydroflavonol-4-reductase | SAMN06295900_11386 | Not Available | Positive | 4785934 - 4786944 | 36590.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.