Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN06295900_11367 | Not Available | Positive | 4765748 - 4766557 | 28788.8 |
| transcriptional regulator, lysr family | SAMN06295900_11368 | Not Available | Negative | 4766624 - 4767523 | 32648.7 |
| l-lysine exporter family protein lyse/argo | SAMN06295900_11369 | Not Available | Positive | 4767634 - 4768251 | 21823.1 |
| hypothetical protein | SAMN06295900_11370 | Not Available | Positive | 4768380 - 4768571 | 6616.09 |
| glycosyl transferase family 2 | SAMN06295900_11371 | Not Available | Negative | 4768672 - 4769538 | 32320.8 |
| glycogen debranching enzyme, putative | SAMN06295900_11372 | Not Available | Positive | 4769826 - 4771859 | 75157.4 |
| gluconolactonase | SAMN06295900_11373 | Not Available | Negative | 4771917 - 4772858 | 34555.9 |
| hypothetical protein | SAMN06295900_11374 | Not Available | Negative | 4772928 - 4773365 | 16099.2 |
| putative abc transport system permease protein | SAMN06295900_11375 | Not Available | Negative | 4773504 - 4774682 | 41482.1 |
| putative abc transport system permease protein | SAMN06295900_11376 | Not Available | Negative | 4774679 - 4775824 | 42303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.