Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11357 | Not Available | Negative | 4756983 - 4757258 | 9508.56 |
| hypothetical protein | SAMN06295900_11358 | Not Available | Positive | 4757650 - 4757826 | 6264.5 |
| short chain dehydrogenase | SAMN06295900_11359 | Not Available | Positive | 4757946 - 4758128 | 6369.61 |
| dnaj domain-containing protein | SAMN06295900_11360 | Not Available | Negative | 4758229 - 4758936 | 25660.8 |
| transcriptional regulator, tetr family | SAMN06295900_11361 | Not Available | Positive | 4759296 - 4759883 | 21435.9 |
| hypothetical protein | SAMN06295900_11362 | Not Available | Positive | 4760146 - 4760391 | 9024.76 |
| outer membrane porin, oprd family | SAMN06295900_11363 | Not Available | Negative | 4760485 - 4761885 | 50340.9 |
| proton-dependent oligopeptide transporter, pot family | SAMN06295900_11364 | Not Available | Positive | 4762308 - 4763816 | 53720.1 |
| uncharacterized conserved protein yece, duf72 family | SAMN06295900_11365 | Not Available | Positive | 4763908 - 4764741 | 31102.8 |
| transcriptional regulator, iclr family | SAMN06295900_11366 | Not Available | Negative | 4764801 - 4765637 | 29405.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.