Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11326 | Not Available | Negative | 4717853 - 4718134 | 10566.3 |
| predicted amidohydrolase | SAMN06295900_11327 | Not Available | Negative | 4719441 - 4720451 | 35254.3 |
| transcriptional regulator, lysr family | SAMN06295900_11328 | Not Available | Positive | 4720513 - 4721424 | 32475.2 |
| hypothetical protein | SAMN06295900_11329 | Not Available | Negative | 4721452 - 4721727 | 9932.78 |
| formate dehydrogenase subunit gamma | SAMN06295900_11330 | Not Available | Negative | 4721930 - 4722556 | 23331.1 |
| formate dehydrogenase (quinone-dependent) iron-sulfur subunit | SAMN06295900_11331 | Not Available | Negative | 4722553 - 4723476 | 33742.1 |
| formate dehydrogenase (quinone-dependent) catalytic subunit | SAMN06295900_11332 | Not Available | Negative | 4723490 - 4725922 | 89729.7 |
| formate dehydrogenase (quinone-dependent) catalytic subunit | SAMN06295900_11334 | Not Available | Negative | 4725971 - 4726561 | 21476.7 |
| pp_04192 | SAMN06295900_11335 | Not Available | Positive | 4726730 - 4727653 | Not Available |
| outer membrane protein (porin) | SAMN06295900_11336 | Not Available | Positive | 4727962 - 4729125 | 40205.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.