Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_11315 | Not Available | Positive | 4704955 - 4705905 | 34450.2 |
| transcriptional regulator, luxr family | SAMN06295900_11316 | Not Available | Negative | 4705909 - 4707390 | 52274.6 |
| aconitase | SAMN06295900_11317 | Not Available | Positive | 4707631 - 4710216 | 92712.8 |
| hypothetical protein | SAMN06295900_11318 | Not Available | Negative | 4710150 - 4710752 | 23121.0 |
| hypothetical protein | SAMN06295900_11320 | Not Available | Negative | 4711006 - 4711218 | 7675.42 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06295900_11321 | Not Available | Negative | 4711215 - 4712141 | 33191.6 |
| transcriptional regulator, arac family | SAMN06295900_11322 | Not Available | Positive | 4712375 - 4713313 | 34763.6 |
| selenocysteine-specific translation elongation factor selb | SAMN06295900_11323 | Not Available | Negative | 4713259 - 4715169 | 69467.8 |
| l-seryl-trna(sec) selenium transferase | SAMN06295900_11324 | Not Available | Negative | 4715166 - 4716656 | 52819.4 |
| fdhe protein | SAMN06295900_11325 | Not Available | Negative | 4716653 - 4717588 | 33541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.