Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(5)u-1939 methyltransferase | SAMN06295900_112116 | Not Available | Positive | 4602843 - 4604210 | 49951.4 |
| modulator of ftsh protease | SAMN06295900_112117 | Not Available | Negative | 4604357 - 4605055 | 25048.4 |
| nucleoside diphosphate kinase | SAMN06295900_112118 | Not Available | Positive | 4605289 - 4605714 | 15502.7 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN06295900_112119 | Not Available | Positive | 4605846 - 4606988 | 41584.3 |
| cytoskeleton protein rodz | SAMN06295900_112120 | Not Available | Positive | 4607152 - 4608228 | 35930.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN06295900_112121 | Not Available | Positive | 4608326 - 4609618 | 46245.6 |
| histidyl-trna synthetase | SAMN06295900_112122 | Not Available | Positive | 4609642 - 4610982 | 49831.6 |
| putative negative regulator of rcsb-dependent stress response | SAMN06295900_112123 | Not Available | Positive | 4611064 - 4611693 | 22704.6 |
| beta-barrel assembly machine subunit bamb | SAMN06295900_112124 | Not Available | Positive | 4611758 - 4612903 | 40264.0 |
| gtp-binding protein | SAMN06295900_112125 | Not Available | Positive | 4613229 - 4614566 | 49108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.